CDS

Accession Number TCMCG002C10356
gbkey CDS
Protein Id XP_020091056.1
Location join(9433344..9433615,9434281..9435934)
Gene LOC109712044
GeneID 109712044
Organism Ananas comosus

Protein

Length 641aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA371634
db_source XM_020235467.1
Definition replication protein A 70 kDa DNA-binding subunit A isoform X1 [Ananas comosus]

EGGNOG-MAPPER Annotation

COG_category L
Description Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses
KEGG_TC -
KEGG_Module M00288        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03000        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K07466        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03030        [VIEW IN KEGG]
ko03420        [VIEW IN KEGG]
ko03430        [VIEW IN KEGG]
ko03440        [VIEW IN KEGG]
ko03460        [VIEW IN KEGG]
map03030        [VIEW IN KEGG]
map03420        [VIEW IN KEGG]
map03430        [VIEW IN KEGG]
map03440        [VIEW IN KEGG]
map03460        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000280        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0000790        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0007127        [VIEW IN EMBL-EBI]
GO:0007129        [VIEW IN EMBL-EBI]
GO:0007131        [VIEW IN EMBL-EBI]
GO:0007140        [VIEW IN EMBL-EBI]
GO:0007141        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007276        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009555        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0019953        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022412        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032504        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035825        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044703        [VIEW IN EMBL-EBI]
GO:0045132        [VIEW IN EMBL-EBI]
GO:0045143        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048232        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0048609        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051026        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051321        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061982        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070192        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0098813        [VIEW IN EMBL-EBI]
GO:0140013        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1903046        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGCCGGCGGCGGCGAGGCTCACGGCGAACGCGATCGCCGCCGTGAGCGGCGGCGATCTGAACCTGAAGCCGGTGGTGCAGGTGGTGGAGCTGAAGCAGGTCCCCGGCGCAGCCCAGGAGCGGTTCCGGGCGCTGGTCTCGGACGGCTCCGCGGCGCACCAGGCGCTCTTGGCGACGCAGCTCAACGCGCTAGTCAAAGCGCGGCGGCTGCGACGGGGATCCGTCGTCCAGCTCCTCGAGTACATATGTAGCACCGTACAGAATCGTAGGATTATTATTATTCTGAACATGGAAGTAATAATTCCTGAGTGTGAGATTATTGGTAATCCAAGCCTCCCTCCTGAAGCTGAACCAGTCTCTCAGAATGTTTCATCTACTAACAATTCAGGCAGCTTTACAAGGGAGACACTTAATGGTTCAGCTGGCTCGGATTCAAATTCAGTAGCACGACTTGTTTCTAAGTCATCTGCTAATCCTGCTAATGGTGCCCCAAGCTTTCCACCAACAATTCAACCTTCTTACAAGCCTCCTCCAATGTACAAAAACCGTGGCGCAATCATGAAGAATGAGGCACCGGCTCGTATAATACCAATAGCCGCTCTAAATCCTTATCAGGGGCGATGGGCCATCAAAGCTAGAGTAACTGCCAAAGGAGATATCCGCCGTTATAATAATGCCAAGGGAGATGGGAAAGTGTTCTCCTTTGATCTCCTCGATTCAGATGGAGGAGAGATACGAGTGACCTGCTTTAATTCTGTCGTAGATCGTTTCTACGAGGTCGTAGAGGTAGGAAAGGTTTATGTGATGTCAAAGGGCAGTTTGAAGCCAGCAAAGAAGAACTTCAACCATCTTAACAATGAGTGGGAGATATTTTTGGAGGCAGCCTCGACTGTGGAGCCATGTCCAGATGAGAATGACTCTATACCGACCCAGCAGTTTAATTTCAGGCCAATCAGTGAAATCGAGAATGCAGAGAACAACTCTATTCTGGATATCATCGGGATTGTTACATCCGTGAACCCTTCAGTCACTATACTGAGGAAAAATGGCATGGAAACTCAGAGAAGGATTATGAATTTGAAGGATGAGTCCGGTAAAAGTGTTGAGTTAACTTTGTGGGGTGAATTTTGCAACAAAGAAGGTAGCCAGCTCCAAGAAGCACTTGATTCTGGATTCTTCCCCGTGTTAGCTGTTAAGGCGGGAAAGGTGAATGATTTCAGTGGTAAATCAGTGGGCACAATCTCTTCCACACAACTTTTTATGAATCCTAATCTTCCAGAAGCTGATAGATTAAAAGTGTGGTTTGATGGAGGGGGAAAGAATGCTGCTTCGCAATCTATATCAAAGGATGTTATGCCTGCGTTTTCTCAGAATTTGATCCGGAAAACCATATCACAGATAAAGGACGAGGGCCTTGGCAGGGGAGAAAGGCCCGACTGGGTCACAGTGAAAGCGACCGTCTCGTTCATTAAGGCGGACAACTTTTGTTACACTGCTTGTCCATTGATGATTGGTGATAGGCAATGCAATAAGAAGGTGACGAAAGTTGCTGGTGGGAACTGGTGCTGTGATAGATGCGATAAAGAGTTTGAAGAGTGCGATTATAGGTATCTTCTCCAGGTACAGGTTCAAGATCACACAGGGCTTACCTGGGTGACAGCTTTCCAGGAGTCAGGAGAGGATATTCTGGGTTGCTCGGCAAAGGAGTTATACAAGCTCAAGTACGAAGAGAATGATGATATTAGGTTTCCAGAAATCATGCGGCGTAGTCTATTTGAGCAGTACCTATTCAGGCTGAAAATTAAGGAGGAACTGTATGGAGATGAGCAGAAGGTAAAGATTACAGCAGTTAAAGCAGAGAAAGTGAATCCTTCGATGGAAAGTCGATATCTACTGGACTTGATTGGACGGCACTCTGTGTAA
Protein:  
MAPAAARLTANAIAAVSGGDLNLKPVVQVVELKQVPGAAQERFRALVSDGSAAHQALLATQLNALVKARRLRRGSVVQLLEYICSTVQNRRIIIILNMEVIIPECEIIGNPSLPPEAEPVSQNVSSTNNSGSFTRETLNGSAGSDSNSVARLVSKSSANPANGAPSFPPTIQPSYKPPPMYKNRGAIMKNEAPARIIPIAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDLLDSDGGEIRVTCFNSVVDRFYEVVEVGKVYVMSKGSLKPAKKNFNHLNNEWEIFLEAASTVEPCPDENDSIPTQQFNFRPISEIENAENNSILDIIGIVTSVNPSVTILRKNGMETQRRIMNLKDESGKSVELTLWGEFCNKEGSQLQEALDSGFFPVLAVKAGKVNDFSGKSVGTISSTQLFMNPNLPEADRLKVWFDGGGKNAASQSISKDVMPAFSQNLIRKTISQIKDEGLGRGERPDWVTVKATVSFIKADNFCYTACPLMIGDRQCNKKVTKVAGGNWCCDRCDKEFEECDYRYLLQVQVQDHTGLTWVTAFQESGEDILGCSAKELYKLKYEENDDIRFPEIMRRSLFEQYLFRLKIKEELYGDEQKVKITAVKAEKVNPSMESRYLLDLIGRHSV